SPServer

Introduction (click to show/hide)

The Split-Statistical Potentials Server (SPServer) assesses the quality of structural models of protein folds or protein–protein interactions using Split-Statistical Potentials.

See Help, Tutorials, and Aguirre-Plans et al. BMC Bioinformatics (2021).

Quick start guide (click to show/hide)

1. Analysis: Protein folds or protein–protein interactions.
2. Contact definition: CB–CB < 12Å or min atom–atom < 5Å.
3. Upload: PDB / mmCIF or .zip / .tar.gz (max 10 MB).

Analysis set-up

1. Analysis to run Protein Folds Protein-Protein Interactions

2. Contact definition CB-CB distance < 12A Minimum residue-residue distance < 5A

Input file(s)

IMPORTANT: input files cannot exceed 10MB.

3. Upload the structure(s):

	File:
	Add structure

PDB or mmCIF, or .zip / .tar.gz / .tgz. Do not include "#" in file names.

Example with precalculated data
Download example input

	Receptor chain:	Ligand chain:	File:
	Add structure